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KMID : 0364820190550030280
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Korean Journal of Microbiology
2019 Volume.55 No. 3 p.280 ~ p.282
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Genome sequence of Bifidobacterium dentium strain ATCC 15424 originally isolated from pleural fluid of an empyema patient
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Moon Ji-Hoi
Kim Sue-Gene
Yang Seok-Bin
Jang Eun-Young
Shin Seung-Yun
Lee Jin-Yong
Lee Jae-Hyung
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Abstract
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We present here a draft genome sequence of Bifidobacterium dentium strain ATCC 15424, originally isolated from pleural fluid of an empyema patient. The genome is 2,625,535 bp in length and has a GC content of 58.5%. The genome includes 2,154 protein-coding genes, 4 rRNAs, and 55 tRNAs. Unlike other B. dentium strains isolated from human dental caries, ATCC 15424 carries 247 strain-specific genes, including prophage remnants and type III/IV secretion system proteins, N-acetylmuramoyl- L-alanine amidase, and PRTRC system protein E. The sequence information will contribute to understanding of the natural variation of B. dentium as well as the genome diversity within the bacterial species.
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KEYWORD
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Bifidobacterium dentium, genome, pleural fluid isolate
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